EMB Agar: Composition, Principle, and Colony Morphology

Eosin Methylene Blue (EMB) agar is a selective and differential culture medium. It selectively promotes the growth of Gram-negative bacteria and aids in the differentiation of lactose fermenter and non-lactose fermenting colonies.

EMB Agar is used for the isolation of fecal coliforms. EMB Agar can be streaked for isolation or used in the Membrane Filter Technique. EMB agar inoculated with Escherichia coli demonstrates growth with green-metallic sheen colonies.

EMB Agar
Escherichia coli colonies in Eosin Methylene Blue Agar
(Note: Greenish Metallic Sheen)

EMB agar, first described by Holt-Harris and Teague, contained lactose and sucrose as sources of carbohydrates. Levine modified the medium by adding peptone and phosphate, removing sucrose from the formula, and increasing the lactose content. This aided in differentiating fecal and non-fecal types of coliforms. It also differentiates salmonellae and other non-lactose fermenters from the coliforms.

Another commonly used media for selective isolation of Gram-negative rods and differentiation of the member of Enterobacteriaceae as lactose fermenter and non-lactose fermenter is MacConkey Agar


EMB agar contains sucrose and lactose, utilized as fermentable carbohydrates substrates, which encourage the growth of some gram-negative bacteria, especially fecal and non-fecal coliforms. Differentiation of enteric bacteria is possible due to the presence of the sugars lactose and sucrose in the EMB agar and the ability of certain bacteria to ferment the lactose in the medium.

  • Lactose-fermenting gram-negative bacteria acidify the medium, which reduces the pH, and the dye produces a dark purple complex usually associated with a green metallic sheen. This metallic green sheen indicates vigorous lactose and/or sucrose fermentation ability typical of fecal coliforms.
  • Organisms that are slow lactose-fermenters produce less acid, and the colonies appear brown-pink.
  • Non-lactose fermenters increase the pH of the medium by deamination of proteins and produce colorless or light pink colonies.

Eosin Y and methylene blue are pH indicator dyes that combine to form a dark purple precipitate at low pH; they also inhibit the growth of most Gram-positive organisms. Peptic digest of animal tissue is a source of carbon, nitrogen, and other essential growth nutrients. Phosphate buffers the medium.

Composition of EMB Agar

The composition of EMB agar and modified EMB agar (Levine EMB) agar differs slightly. Levine modification contains 10g of lactose (twice as in EMB agar) and no sucrose.

IngredientsEMB agar (gm/L)Levine EMB agar (gm/L)
Peptone10 g10g
Lactose5 g10g
Eosin Y0.4g0.4g
Methylene blue0.065g0.065g
pH: 7.1 ± 0.2 at 25 °C.

Preparation of EMB agar

  1. Weigh and suspend 35.96 grams of dehydrated media in 1000 ml distilled water.
  2. Mix until the suspension is uniform and heat to boiling to dissolve the medium completely.
  3. Sterilize by autoclaving at 15 lbs pressure (121°C) for 15 minutes. 
  4. Cool to 45-50°C, and with frequent gentle swirling, pour the media into sterile Petri plates. Note: frequent swirling is recommended to restore the blue color o methylene blue and to suspend the flocculent precipitate, if any.
  5. Label with initials of the name of the medium, and the date of preparation.
  6. Store the plates upside down (lids below) in the refrigerator until use.

Colony Morphology

EMB agar inoculated with Escherichia coli demonstrating growth with green-metallic sheen colonies. (Image source:Carmen Moreno González)
OrganismColonial appearance on EMB agar
Escherichia coliColonies are 2-3 mm in diameter and have a greenish metallic sheen in reflected light, dark or even black center in transmitted light.
Enterobacter aerogenes Colonies are 4-6mm in diameter, raised and mucoid, tending to become confluent.
No metallic sheen, grey-brown centers by transmitted light
Salmonella and Shigella sppTranslucent and colorless colonies

Pseudomonas sppColorless irregular colonies
Proteus sppColorless colonies
Gram-positive cocciPartially inhibited or no growth
Coagulase-positive staphylococciColorless, “pin-point” colonies on modified EMB

Quality Control of EMB agar

Sterility testing can be performed by incubating 3-5% uninoculated plates from each batch at 37°C for 18-24 hours. Any growth in the media should be regarded as contamination, and the whole lot should be discarded.

Performance testing of prepared EMB agar plates can be done by inoculating known strains of bacteria into the medium and observing growth and colonial characteristics.

OrganismGrowth and colony characteristics
E.coli ATCC 25922Good growth, blue-black colonies with a green metallic sheen
Salmonella choleraesuis subsp. Choleraesuis serotype Typhimurium ATCC 14028Luxuriant growth, colorless to amber colonies
Enterococcus faecalis ATCC 29212Inhibition (partial)
Shigella flexneri ATCC 12022Moderate to heavy growth, colorless to amber colonies

Uses of EMB agar

Isolation and differentiation of lactose fermenting and non-lactose fermenting enteric bacilli.

  1. EMB agar is used in water quality tests to distinguish coliforms and fecal coliforms that signal possible pathogenic microorganism contamination in water samples (presence of E.coli in the water sample indicates the possibility of fecal contamination of water, so does the presence of other pathogenic enterics).
  2. EMB media assists in the visual distinction of Escherichia coli, other nonpathogenic lactose-fermenting enteric gram-negative rods, and the Salmonella and Shigella genera. Escherichia coli colonies grow with a metallic sheen with a dark center. Aerobacter aerogenes colonies have a brown center, and non-lactose-fermenting gram-negative bacteria appear pink.
  3. EMB agar is also used to differentiate the organisms in the colon-typhoid-dysentery group. For culture of Salmonella and Shigella, selective medium such as MacConkey agar and EMB agar is commonly used.
  4. Levine EMB Agar can be used to isolate and identify Candida albicans from clinical specimens. Addition of 0.1g/L of chlortetracycline hydrochloride after autoclaving makes the medium selective by inhibiting the accompanying bacterial flora. The culture medium then is blue in color. Colonies of Candida albicans appear `spidery’ or `feathery’ after 24 to 48 hours of incubation at 35°C in 10% carbon dioxide. Other Candida species produce smooth yeast-like colonies.

References and further readings

  • ASMscience | Eosin-Methylene Blue Agar Plates Protocol. Retrieved June 12, 2020, from https://www.asmscience.org/content/education/protocol/protocol.2869
  • Welcome to Microbugz—Eosin Methylene Blue Agar. Retrieved June 12, 2020, from https://www.austincc.edu/microbugz/eosin_methylene_blue_agar.php
  • Eosin Methylene Blue Agar (EMB). (2016, April 12). Biology LibreTexts.

Acharya Tankeshwar

Hello, thank you for visiting my blog. I am Tankeshwar Acharya. Blogging is my passion. As an asst. professor, I am teaching microbiology and immunology to medical and nursing students at PAHS, Nepal. I have been working as a microbiologist at Patan hospital for more than 10 years.

18 thoughts on “EMB Agar: Composition, Principle, and Colony Morphology

  1. Good day,
    Please I need a help,I am working on water sample. What agar can I use in place of membrane feacal coliform agar in order to isolate feacal coliform.

    1. In our laboratory, we first incubate the water sample in MacConkey broth (please refer to MPN method) if result comes positive, we streak it (from MacConkey broth) to EMB Agar and incubate the plate at 44.5°C.

      1. good day. I am working in a food industry as a microbiology analyst, i would like to know if lactose broth is also effective in getting result for water sample specially in getting result for e.coli. thanks.

      2. For EMB Agar, does only E.coli turn sheen green, or are there other microorganisms, and if so which ones.

  2. please, i am a water microbiologist and would like to know how to distinguish E.coli from Total coliform on EMB Agar……..

  3. i carried out a research titled “the common bacteria associated with the hands of primary pupils” here in a local government in Nigeria using two primary schools as a study area. the sample was collected according to Age, Gender, and Schools. the bacteria isolated includes: staphylococcus aureus, staphylococcus epidermidis, pseudomonas sp, and Escherichia coli. am confuse on how to arrange the tables in respect to Age, school, organisms isolated and the type of statistical method/ tool to use. pls help me with the table using even a sample of the table.thanks.

  4. how can I carry a swab on door handle and subsequent plating on EMB agar for identification and enumeration?

  5. My name is Ella Pilot and I’m doing a science fair project looking at bacteria in the soil of my school’s playground to see if it’s fecal coliform. We believe it may be because of the smell that comes during the spring run-off. We had a pond near right behind the school, that got filled in when houses were built over top, and now we get the water run-off from the houses on two of the sides of our playground.
    Could I send you the pictures of the colonies I prepared in EMB agar? I need help identifying the bacteria colonies.

    Thanks for taking the time to read this and reply.

    Ella Pilot

    1. Thank you so much Akenji. In your convenience, please share how it can be made more useful to visitors.

  6. Hello i am in microbiology right now as a sophomore in high school and I am having trouble identifying what bacteria grew on the EMB agar plate.. It is gram negative and grew purple with clear in some area around the edges any clue?

    1. Jessica
      EMB agar is a selective media(only Gram-negative bacteria grow in it). Lactose fermenter (such as Escherichia coli, Klebsiella spp, Citrobacter spp, Enterobacter spp), give purple color (colorless colonies by Non-lactose fermenter), but you have to use panel of biochemical tests to identify the isolate you have.

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