Columbia CNA Agar: Composition, Uses, and Colony Characteristics
Columbia CNA agar selects for gram-positive organisms by inhibiting gram-negatives with colistin and nalidixic acid. Learn when to use it, which organisms grow, and how colony appearance aids identification.
A wound swab from a diabetic foot ulcer is plated on both MacConkey agar (for gram-negatives) and Columbia CNA agar (for gram-positives) in parallel. MacConkey grows several gram-negative species. Columbia CNA, by inhibiting those gram-negatives, allows the streptococci and staphylococci in the mixed flora to grow without competition — revealing a Streptococcus agalactiae (Group B streptococcus) that might have been missed on blood agar alone.
Columbia CNA agar is designed around a simple clinical reality: specimens from skin, wounds, genital tract, and respiratory tract contain a mixture of gram-positive and gram-negative organisms. Selectively growing gram-positives allows clearer identification of Staphylococcus, Streptococcus, and Enterococcus species from specimens where these organisms would otherwise be obscured.
Columbia agar with colistin and nalidixic acid (CNA) is a selective and differential medium for isolating and differentiating pathogenic gram-positive cocci from clinical and non-clinical samples. Antimicrobials colistin (C) and nalidixic acid (NA) inhibit gram-negative organisms.
Colistin, a polypeptide antibiotic of the polymyxin group, disrupts the cell membranes of gram-negative organisms. Nalidixic acid, a first-generation quinolone, blocks DNA replication in susceptible gram-negative bacteria.
Columbia agar base is a nutritionally rich formula containing three peptone sources and 5% defibrinated (whole blood with fibrin removed to prevent clotting) sheep blood. This supportive medium is used to differentiate bacterial colonies based on the hemolytic reactions.
Gram-negative bacteria such as members of Enterobacteriaceae and Pseudomonas species are suppressed, while staphylococci, streptococci, enterococci, and yeast grows on Columbia CNA agar.
Figure: Columbia CNA agar
Composition
Columbia CNA agar is prepared by adding 10 mg/liter of colistin and 15 mg/liter of nalidixic acid in Columbia Agar Base.
| Product | Gram/Liter |
|---|---|
| Casein-Meat Peptone | 10 g |
| Casein-Yeast Peptone | 10 g |
| Heart Peptone | 3 g |
| Sodium chloride | 5 g |
| Corn starch | 1 g |
| Agar | 13.5 g |
| Defibrinated sheep blood | 50 mL |
| Colistin sulfate | 10 mg |
| Nalidixic Acid | 15 mg |
| pH: 7.3 +/- 0.2 |
Columbia agar base is a nutritionally rich medium containing 5% defibrinated blood. Sheep blood provides X and V factors for the growth of fastidious gram-positive bacteria and helps differentiate them based on hemolytic reactions.
Peptone supports the luxuriant growth of microorganisms. Cornstarch serves as a neutralizer source. The composition of Columbia CNA agar is as follows*;
*Variations in the composition may be seen in media prepared by different manufacturers.
Why colistin and nalidixic acid specifically?
- Colistin (polymyxin E) disrupts the outer membrane of gram-negative bacteria — it is bactericidal for most gram-negative rods but has no activity against gram-positive organisms (which lack the outer membrane target)
- Nalidixic acid (a quinolone) inhibits DNA gyrase in gram-negative organisms; gram-positive organisms are intrinsically resistant to nalidixic acid at the concentrations used in CNA agar Together, they create a highly selective environment for gram-positive organisms. Neither agent inhibits the growth of Staphylococcus, Streptococcus, or Enterococcus.
Exception: Pseudomonas aeruginosa and some other non-fermentative gram-negatives are intrinsically resistant to nalidixic acid and may grow on CNA. Colistin usually inhibits them, but mucoid Pseudomonas in particular can break through.
Preparation of Media
- Suspend 44.02 grams in 1000 ml purified/distilled water.
- Heat to boiling to dissolve the medium completely. Do not overheat the medium.
- Sterilize by autoclaving at 15 lbs pressure at 121 for 15 minutes.
- Cool to 45-50°C and aseptically add 5% v/v sterile, defibrinated blood.
- Mix well and pour into sterile Petri plates (20-25 ml per plate in 90 mm Petri plate).
Storage and Shelf Life
Columbia CNA Agar should be protected from light and stored at 4°C to 8°C.
The medium side should be uppermost to prevent excessive moisture accumulation on the agar surface. Under these conditions, the medium has an 8-week shelf life from the date of manufacture.
Quality Control
After checking for correct pH, color, depth, and sterility, the following organisms are used to determine the growth performance of the completed medium.
| Organism | Expected Result |
|---|---|
| Streptococcus pyogenes | Growth, β-hemolysis |
| Streptococcus pneumoniae | Growth, α-hemolysis |
| Staphylococcus aureus | Growth β-hemolysis or no-hemolysis |
| Proteus mirabilis | Partial inhibition |
Inoculation of the Medium
- Allow the medium to reach room temperature before inoculation.
- Using a direct inoculum from the specimen, perform a four-quadrant streak to obtain well-isolated colonies. If desired, stabs into the medium can also be made to improve and better observe hemolytic reactions.
- Depending on the organism of interest, incubate plates aerobically, anaerobically, or in a CO2-enriched environment at 35°C. The hemolytic reaction of some streptococci is influenced by the atmospheric environment of the incubator. For optimal results, culture plates are incubated in a 5% CO2-enriched environment.
- Examine after 24 and 48 hours.
Interpretation of Results
After incubation, examine plates for growth and hemolysis. To observe hemolysis, view the culture plates with a bright light transmitting behind the plate. Four types of hemolysis can be seen in Columbia CNA Agar:
- Alpha-hemolysis: Partial hemolysis results in a greenish discoloration around the colony.
- Beta-hemolysis: Complete lysis of red blood cells resulting in a clear zone around the colonies.
- Gamma-hemolysis: No hemolysis resulting in no change in the medium.
- Alpha-prime-hemolysis: A small zone of complete hydrolysis surrounded by an area of partial hemolysis.
Uses
On conventional blood agar, gram-negative bacilli may outgrow gram-positive cocci. Columbia CNA agar helps to isolate gram-positive cocci (Streptococcus species and Staphylococcus species) when present in a mix-culture with gram-negative bacilli. The addition of sheep blood helps to differentiate species of Streptococcus as well.
Organisms on Columbia CNA Agar: Colony Appearance
| Organism | Colony Appearance | Beta-haemolysis? | Notes |
|---|---|---|---|
| Staphylococcus aureus | Large, golden-yellow, opaque | Variable (beta on blood-supplemented CNA) | Coagulase test to confirm |
| CoNS (S. epidermidis, S. saprophyticus) | Small, white-grey, opaque | No | Novobiocin test differentiates S. saprophyticus |
| Streptococcus pyogenes (GAS) | Small, translucent | Yes — wide clear zone | Bacitracin sensitive |
| Streptococcus agalactiae (GBS) | Small, grey, opaque | Narrow, incomplete beta | CAMP test positive |
| Streptococcus pneumoniae | Small, flat, alpha-haemolytic | Alpha (greenish) | Draughtsman colonies; optochin sensitive |
| Enterococcus faecalis | Small, grey, non-haemolytic | No (or alpha) | Bile-esculin positive; salt tolerant |
| Listeria monocytogenes | Small, grey, beta-haemolytic | Narrow beta zone | Tumbling motility at 25°C |
Note: Columbia CNA is typically blood-supplemented (5% sheep blood) to allow haemolysis observation — the most important differential feature for streptococcal identification.
When to Use Columbia CNA Agar
CNA agar is not a routine medium for all specimens — it is specifically indicated when:
| Clinical Situation | Reason |
|---|---|
| Wound and skin infections with mixed flora | Suppresses gram-negatives; reveals gram-positive pathogens |
| Vaginal swabs (GBS screening in pregnancy) | Isolates GBS from mixed vaginal flora |
| Genital specimens (bacterial vaginosis workup) | Isolates gram-positive organisms |
| Respiratory specimens with heavy gram-negative contamination | Allows streptococcal isolation |
| Specimens from patients on broad-spectrum gram-positive antibiotics | Selects resistant gram-positive survivors |
Routinely used alongside: Blood agar (for full flora growth), MacConkey agar (for gram-negatives). CNA + MacConkey + blood agar form a standard primary isolation set for wound and genital specimens.
Key Exam Facts in One Table
| Feature | Detail |
|---|---|
| Full name | Columbia Colistin Nalidixic Acid agar |
| Type | Selective medium — selects for gram-positive organisms |
| Selective agents | Colistin (inhibits gram-negatives via outer membrane disruption) + Nalidixic acid (inhibits gram-negative DNA gyrase) |
| Base medium | Columbia agar base (rich nutritional base) |
| Blood supplement | Usually 5% sheep blood added — allows haemolysis observation |
| Organisms that grow | Gram-positive cocci — Staphylococcus, Streptococcus, Enterococcus, Listeria |
| Organisms inhibited | Most gram-negative rods — E. coli, Klebsiella, Proteus, Salmonella |
| Common breakthrough | Mucoid Pseudomonas aeruginosa — colistin-resistant strains may grow |
| Primary use | Isolation of gram-positive organisms from mixed specimens |
| Clinical setting | Wound swabs, vaginal swabs (GBS), genital, respiratory |
| Complement with | MacConkey (gram-negatives) + blood agar (all organisms) |
References
- Forbes BA, Sahm DF, Weissfeld AS. Bailey & Scott's Diagnostic Microbiology. 14th ed. Elsevier; 2023.
- Koneman EW, Allen SD, Janda WM, Schreckenberger PC, Winn WC. Koneman's Color Atlas and Textbook of Diagnostic Microbiology. 6th ed. Lippincott Williams & Wilkins; 2006.
- Murray PR, Rosenthal KS, Pfaller MA. Medical Microbiology. 9th ed. Elsevier; 2020.
- Garcia LS. Clinical Microbiology Procedures Handbook. 4th ed. ASM Press; 2016.
- Centers for Disease Control and Prevention. Group B Strep (GBS): Prevention — Clinical Overview. https://www.cdc.gov/groupbstrep/clinicians/clinical-overview.html
- Facklam RR, Carey RB. Streptococci and aerococci. In: Lennette EH, Balows A, Hausler WJ, Shadomy HJ, eds. Manual of Clinical Microbiology. 4th ed. Washington DC: ASM Press; 1985.
Frequently Asked Questions
How do colistin and nalidixic acid in Columbia CNA agar selectively inhibit gram-negative bacteria?
What is Columbia CNA agar used for in obstetric practice?

Tankeshwar Acharya, MSc (Medical Microbiology)
Tankeshwar Acharya is an Assistant Professor in the Department of Microbiology at Patan Academy of Health Sciences (PAHS), Nepal, where he has been teaching and practicing clinical microbiology for over 14 years. He is the founder of Microbe Online, one of the leading free microbiology education resources on the web, covering bacteriology, mycology, parasitology, immunology, and clinical laboratory diagnostics written from direct experience in both the classroom and the diagnostic laboratory.