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Differences and Similarities Between Bacteria and Fungi

Bacteria are microscopic unicellular organisms found almost everywhere on the Earth. These are critical for ecosystems as they effortlessly recycle nitrogen, carbon, and sulfur. These can also cause harmful diseases to humans, animals, and plants. Some bacterial species can grow in extreme conditions like high temperature, low pH, and high pressure. 

Fungi are microscopic unicellular or multicellular organisms. Most fungi inhabit soil and dead organisms and play a crucial role in mineralizing organic carbon. Fungi are opportunistic pathogens. But mainly, these decay and decompose food, dead animals, and plants.

The significant difference between bacteria and fungi is their cell; bacteria are prokaryotes, and fungi are eukaryotes. In addition, bacteria and fungi have differences in their growth requirements, cell wall components, size, morphology, colony characteristics, and treatment methods.  

Although bacteria (Monera) and fungi (Mycota) have many differences, they have similarities as well. Both have true cell walls and many beneficial properties, and some species of both kingdoms can cause serious diseases.

Bacteria and fungi under microscope

Similarities Between Bacteria and Fungi

  • Both are microscopic organisms.
  • Fungi and bacteria have a cell wall made up of polysaccharides. Although the components of the cell walls are different, all species of bacteria and fungi have a true cell wall.
  • Some bacteria like Lactobacillus are used as probiotics, Staphylococcus epidermidis as normal skin flora that protects skin from infection, and Escherichia coli in the gut benefit humans. Likewise, yeast is helpful in the production of alcohol and bakery items.
  • Some species of both phyla can cause serious illness. Like aspergilloma (fungus ball) by Aspergillus species, a fungus that can seriously damage the lungs of an infected human. Likewise, cholera by Vibrio cholerae and typhoid by Salmonella species are some of the life-threatening water-borne bacterial diseases.
  • Both of the organisms can be saprophytic or parasitic. E coli and Spirochetes are saprophytic bacteria, whereas almost all fungi are saprophytic.
  • Both bacteria and fungi are heterotrophs, meaning they can grow and feed on plants and animals.
  • Both bacteria and fungi require heat, nutrition, and moisture for growth.
  • The optimum temperature for bacteria and fungi that can cause human infections is 37℃

Difference Between Bacteria and Fungi

PropertiesBacteriaFungi
CellProkaryoticEukaryotic
KingdomBacteria belongs to the kingdom Monera.Fungi belong to the kingdom Mycota.
Optimum growth pH6.5-7.53.8-5.6
Optimum temperature20-37℃ (mesophiles)22-30℃ (saprophytes) 30-37℃ (parasitic)
Light requirementSome photosyntheticNone
Sugar concentration for in vitro growth0.5-1%4-5%
Carbon requirement Inorganic or organicOrganic
Oxygen requirementAerobic or anaerobicStrict aerobes or facultative aerobes
Cell wall componentsPeptidoglycanChitin, cellulose, or hemicellulose
Antibiotic susceptibilityResistant to griseofulvin, susceptible to penicillin, tetracyclines, and chloramphenicolResistant to penicillin, tetracyclines, and chloramphenicol but sensitive to griseofulvin
MorphologySpiral, coccus, and bacillus (rod) are common morphologyHyphae (mold) and yeast are the common morphological forms.
SizeBacteria are smaller in comparison to fungi (average size: about 1-5 microns).The fungi are larger than bacteria (average size: about 5-50 micrometers).
ReproductionBacteria reproduce asexually (binary fission).Reproduction occurs sexually as well as asexually by spores.
SporesBacteria produce spores under unfavorable conditions for survival.Fungal spores are used for reproduction. 
MobilitySome have flagella for movement.Fungi are non-motile.
RibosomeBacteria have prokaryotic ribosomes (70S ribosomes).Fungi have eukaryotic ribosomes (80S ribosomes).
Transmission Bacterial infection transmits by blood, body fluids, air, water, direct contact, and food.Fungal infections transmit by spores.
Location of genetic materialThe genetic material is localized in nucleoids in the cytoplasm.The genetic material is enclosed inside the nucleus.
Incubation timeBacterial colonies grow overnight invitro. Fungal colonies require at least 2-4 days for growth in-vitro condition.
General purpose culture media Nutrient agar and peptone water are generally used for non-fastidious bacteria. SDA (Sabouraud’s dextrose agar), malt extract agar, and PDA (potato dextrose agar) are the general purpose media used for fungi.
Staining technique usedStaining techniques like Gram staining, capsule staining, Giemsa staining, etc., are useful while observing bacteria.Fungi are not stained but mounted using LCPB (lactophenol cotton blue) or KOH. If stained Grocott’s silver stain and periodic acid-Schiff (PAS) are used commonly for observing under the microscope.
Colony morphologyBacterial colonies are smooth, rough, or smooth with defined margins.Fungal colonies are cottony, large and have a fuzzy appearance

References

  • Madiga, M., Martinko, J., Stahl, D., & Clark, D. (2012). Brock Biology of Microorganisms (13th ed., p. 601). Pearson Education.
  • Pelczar Jr., M., Chan, E., & Krieg, N. (2007). Microbiology (5th ed., pp. 334). Tata McGraw-Hill.

Difference between DNA and RNA

DNA stands for deoxyribonucleic acid, which is the hereditary material present in all prokaryotic cells, eukaryotic cells, and some viruses. All the genetic information are encoded in the DNA, which is inherited from parents to offsprings. DNA is mainly present in the chromatin of the cell nucleus and also in mitochondria.

RNA stands for ribonucleic acid, which is present in all living cells and in some viruses. It is mainly involved in the synthesis of protein. RNA is present mainly in the cell cytoplasm and a few in the nucleolus.

DNA and RNA are polymers made up of nucleotides. It consists of phosphodiester bonds, sugars, and nitrogenous bases. Deoxyribose sugar is present in DNA, and ribose sugar is in RNA. The name deoxy suggests an absence of oxygen, which occurs in carbon number 2 of deoxyribose sugar. In the ribose sugar, the OH group is present. The nitrogenous bases present in both DNA and RNA are adenine (A), guanine (G), and cytosine (C). Thymine (T) is present in DNA which is replaced by uracil (U) in RNA.

Characteristics DNA (Deoxyribonucleic acid) RNA (Ribonucleic acid)
Number of strands DNA is usually double-stranded except in parvovirus (single-stranded DNA). RNA is usually single-stranded except in reovirus (double-stranded RNA).
Nitrogenous bases The nitrogenous bases present in DNA are adenine (A), guanine (G), cytosine (C ), and thymine (T). The nitrogenous bases present in RNA are adenine (A), guanine (G), cytosine (C ), and Uracil (U).
Pairing of nitrogenous bases G pairs with C in triple bonds, and A pairs with T in double bonds. The GC boding is similar to DNA, but A pairs with U in double bonds.
Sugar Deoxyribose sugar is present in DNA. The carbon number 2 of deoxyribose sugar contains a hydrogen (H) atom. Ribose sugar is present in RNA. The carbon number 2 of ribose sugar contains hydroxyl (OH) group instead of hydrogen (H) atoms.
Types There are two types of DNA based on location, i.e.,  nuclear DNA and mitochondria DNA. There are different types of DNA based on forms, i.e., A-DNA, B-DNA, C-DNA, D-DNA, E-DNA, and Z-DNA There are three major types of RNA based on their function, i.e.,mRNA (messenger RNA), tRNA (transfer RNA), and rRNA (ribosomal RNA). Based on coding, RNA are two types, i.e., coding (cRNA) and noncoding RNA (ncRNA).
Stability DNA is less reactive than RNA due to the presence of C-H bonds. It is stable in alkaline conditions. DNA grooves are smaller, so destructive enzymes can’t bind easily in them and attack the DNA. RNA is more reactive than DNA due to the presence of hydroxyl bonds. It is not stable in alkaline conditions. RNA grooves are larger, so destructive enzymes can bind easily in them and attack the RNA.
Proportion of purine and pyrimidine DNA has an equal proportion of purine and pyrimidine. Purine and pyrimidine are not in equal proportion.
Synthesis New DNA strands are synthesized by replication. RNA is synthesized by transcription.
Primer Primer is required during DNA synthesis. Primer is not required during RNA synthesis.
Degrading enzyme The enzyme that degrades the DNA is called deoxyribonuclease. The enzyme that degrades the RNA is called ribonuclease.
Leaving nucleus DNA can not leave the nucleus. RNA can leave the nucleus.
Nucleotides and molecular weight DNA has many nucleotides (up to 3-4 million) and high molecular weight. RNA has a few nucleotides (up to 12000) and has a low molecular weight.
UV damage DNA is more susceptible to UV damage as compared to RNA Resistant to UV damage as compared with DNA

References

  • Madigan, M. T., Martinko, J. M., Stahl, D. A., & Clark, D. P. (2011). BROCK Biology of Microorganisms (13th edition). Benjamin Cumming.
  • Pelczar Jr., M., Chan, E., & Krieg, N. (2007). Microbiology (5th edition). Tata McGraw-Hill.

Difference Between Yeast and Mold

Fungi are a group of eukaryotic spore-bearing fungi lacking chlorophyll. The fungi require organic compounds for nutrition. They are heterotrophic organisms that require organic compounds for food. Mycology is the study of fungi. Fungi are of two types; yeast and molds.   

A mold is a multicellular fungus growing in filaments called hyphae. The hyphae are multicellular and have many genetically identical nuclei, but it forms a single organism. However, yeast is a unicellular fungus; that is, the thallus (body of fungi) comprises of a single cell. 

Although yeast and mold have many differences, they possess similarities. One being the phylum and another being their cell wall has chitin. 

The Difference Between Yeast and Mold

PropertiesYeastMold
Cell typeUnicellular eukaryotic organismMulticellular eukaryotic organism
HabitatYeasts can grow in multiple environments like fruits and berries, in the guts and skin of mammals, etc. Molds require damp and moist places for growth. 
Growth temperatureThe ideal temperature for growth is 37℃.The optimum temperature for growth is 28℃.
ShapeYeasts usually have egg-shape, but some are elongated and some spherical.The mycelium appears as a fluffy thread-like structure.
The dusty or fuzzy appearance of mold is due to spores at the end of hyphae.
The spores have different colors like orange, purple, pink black, brown, etc., which gives the mold a distinct appearance. 
SizeThe size of yeast varies widely.
The width ranges from 1-5 µm and length from 5 to 30 µm.
The hyphae are 5-10 µm wide.
Colony morphologyYeast colonies are similar to bacterial colonies but are colorless and are usually non-mucoid or dry in consistency. Mold colonies look fluffy or fuzzy with uneven ends.
They change into different colors, starting from the center.  
StructureThe thallus (body) of yeast has one cell. A true cell wall composed of cellulose, chitin, or hemicellulose surrounds the cell.The thallus of mold has two parts; mycelium and spores.
The mycelium consists of several filaments called hyphae.
The hypha is a tube-like wall that surrounds a cavity called the lumen.
The wall of a hypha is made up of chitin or hemicellulose. 
The spores are single-celled and diverse in shapes and colors.
UsesYeasts are used in ethanol production, bakeries, vitamin supplements, and the study of cells.Molds are used to produce some food like cheese, oncom (a byproduct of tofu), etc. 
ReproductionMost yeasts reproduce by asexual methods like budding.Molds reproduce by spores which can be both asexual and sexual. 
SpeciesMore than 1500 species identifiedMore than 1000 species identified
Diseases causedYeast cause infections in people with compromised immune systems. Molds can cause respiratory disease and allergic reactions in healthy as well as immune-compromised individuals. 
Source of EnergyThe energy source is alcoholic fermentation, which produces ethanol and carbon dioxide as the end product of carbohydrate metabolism.The molds produce a hydrolytic enzyme that degrades the biopolymers like starch and cellulose into simpler carbohydrates.
These simpler compounds are then absorbed by the cell.
ExamplesCandida albicans, Cryptococcus neoformans, etc.,Penicillium, Aspergillus, Rhizopus, etc.

Another type of fungi in yeast, as well as mold, forms are the dimorphic fungi. It converts into the mold when the temperature is 20-25℃ and into yeast at 37℃. It is responsible for causing many diseases in humans and animals. Examples of dimorphic fungi are Histoplasma capsulatum, Blastomyces dermatitidis, Coccidiodes immitis, etc.

References and detailed study

Pelczar Jr., M., Chan, E., & Krieg, N. (2007). Microbiology (5th ed., pp. 333-362). Tata McGraw-Hill.

Differences Between Bacteria and Viruses 

Viruses are submicroscopic particles made by complicated assemblies of proteins, nucleic acids, lipids, and carbohydrates. These smallest infectious agents can infect a human, animal, plant, or bacterial cells. Viruses are strict obligate intracellular parasites incapable of replication without living hosts. Due to the lack of independent replication capability, viruses are considered non-living. 

Bacteria are unicellular prokaryotes. They are ubiquitous and play both beneficial and harmful roles.  Bacteria are used as micro-factories in the industries for synthesizing various important compounds, as a starter culture for making yogurt and cheese, and as probiotics to prevent infections. Pathogenic bacteria can cause diseases from small boils to deadly diseases like meningitis or plague. 

There are many clear-cut structural differences between bacteria and viruses such as size, cellular components, nature, and size of nucleic acid. Other differences lie in the method of replication, host cell requirements, and weapons used to kill them. The main question which always intrigued many is, are viruses alive?

Some of the major differences between bacteria and viruses are summarized in the table below;

VariableBacteriaViruses 
Size
Approximate diameter (um)2
Typical bacterial size ranges from 1-5 μm. Thiomargarita magnifica, the world’s largest bacteria is up to 2 cm long and is visible to the naked eye· It is 50 times bigger than any other known bacteria.Most virus particles range from 0.02 μm to 0.2 μm. A giant DNA virus called Mimivirus has a particle size of 0.7 μm in diameter. 
Life Bacteria are living organisms. Scientists are not sure whether viruses are living or non-living. There is a long ongoing debate among scientists with proponents and opponents of it. 
Structure Bacteria have a nucleus or nucleoid, which contains DNA; this is surrounded by cytoplasm, where proteins are synthesized and energy is generated. Viruses have an inner core of genetic material (either DNA or RNA) but no cytoplasm, and so they depend on host cells to provide the machinery for protein synthesis and energy generation. 
Nature of outer surface Rigid wall containing peptidoglycan Protein capsid and lipoprotein envelope
Motility Some of the bacteria are motile. These bacteria move by means of flagella. Viruses are nonmotile 
Method of Replication Bacteria replicate by binary fission during which one parent cell divides to make two progeny cells while retaining its cellular structure. Viruses disassemble, produce many copies of their nucleic acid and protein, and then reassemble into multiple progeny viruses. 
Host cell requirements for replication Viruses are obligate intracellular parasites. They must replicate within host cells because they lack protein-synthesizing and energy-generating systems. With the exceptions of rickettsiae and chlamydiae, which also require living host cells for growth, bacteria can replicate extracellularly. 
Nature of the nucleic acidBacteria contain both DNA and RNA.Viruses contain either DNA or RNA but not both. 
Genome size Bacterial genome size ranges from 0.6 to 8.0 megabases (Mb) and generally encodes 600–6000 proteins. For example, E. coli strain K12 has a genome size of 4.6 million bases (mb).Viruses vary dramatically in genome sizes. The size of the DNA viruses is larger than that of RNA viruses. The genome size of viruses ranges from the smallest (0.859 kbp) recorded in Circovirus to the largest one (1.9 million base pairs) in Mimivirus. The flu virus (influenza virus) genome contains only 15,000 nucleotides.
Examples Some of the common examples of bacteria are Lactobacillus spp, E. coli, Salmonella Typhi, Staphylococcus aureus, Streptococcus pneumoniae, Mycobacterium tuberculosis, Neisseria gonorrhea, etc. Some popularly known viruses are influenza virus (flu virus), rhinovirus, rotavirus, coronavirus, measles virus, HIV, hepatitis B virus, rabies virus, etc.

* 1 Mb = 1,000,000 bases

You can visit this blog if you are interested in knowing the difference between bacterial and viral infections.

 References and further readings 

  1. Brown N & Bhella D (2016). Are Viruses Alive, Issue: What is Life? Microbiology Society.
  2. What’s the difference between bacteria and viruses? The University of Queensland Australia. Retrieved on 5th July, 2022 from https://imb.uq.edu.au/article/2020/04/difference-between-bacteria-and-viruses 
  3. Claverie JM, Grzela R, Lartigue A, Bernadac A, Nitsche S, Vacelet J, Ogata H, Abergel C. Mimivirus and Mimiviridae: giant viruses with an increasing number of potential hosts, including corals and sponges. J Invertebr Pathol. 2009 Jul;101(3):172-80. doi: 10.1016/j.jip.2009.03.011. Epub 2009 May 18. PMID: 19457438.
  4. Volland JM, Gonzalez-Rizzo S, Gros O, Tyml T, Ivanova N, Schulz F, Goudeau D, Elisabeth NH, Nath N, Udwary D, Malmstrom RR, Guidi-Rontani C, Bolte-Kluge S, Davies KM, Jean MR, Mansot JL, Mouncey NJ, Angert ER, Woyke T, Date SV. A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound organelles. Science. 2022 Jun 24;376(6600):1453-1458. doi: 10.1126/science.abb3634. Epub 2022 Jun 23. PMID: 35737788.

Bacterial vs Viral Infections: Similarities and Differences 

Bacterial infections are caused by bacteria, whereas viruses cause viral infections. Whatever the etiological agent, an infection in a person typically has four stages: 

  1. incubation period: a period when the patient is asymptomatic, 
  2. prodromal period: a period of non-specific symptoms, 
  3. specific-illness period: a period when characteristics, symptoms, and signs appear, and 
  4. recovery period: in this period, illness wane, and the patient regains good health.

While bacteria and viruses can both cause mild to serious infections, use similar modes of transmission, and have almost similar courses of infection, these infections also differ. The easiest difference anyone can figure out is bacterial infections are caused by bacteria, while viruses cause viral infections. Perhaps the most applicable difference is antibiotics are used to kill bacteria but ineffective for viruses.

Features of Viral Infections

  1. Most viral infections are asymptomatic. Of those infections that are symptomatic, most are mild and self-limiting. Most viral infections are either localized to the portal of entry (common cold involves only the upper respiratory tract, influenza is localized in upper and lower respiratory tracts) or spread systemically throughout the body, for example, poliomyelitis, measles, etc. Systemic infections are the most serious viral infections.
  2. The severity and outcome of viral infections are affected by several variables such as age, immune status, nutritional status, etc.
    1. Age is a significant variable in the outcome of viral infections. Generally, infections are more severe in neonates and the elderly than in older children and young adults.
    2. Malnutrition leads to more severe viral infections. For example, cases of measles infections in developing countries.
    3. Immunosuppression predisposes to various viral infections and increases the severity of the disease, which is mild in the immune-competent hosts.
    4. Increased corticosteroids suppress host defenses and predispose them to more severe viral infections, such as varicella-zoster virus, disseminated herpes virus infection, etc.
  3. Types of viral infections
    • Disseminated or systemic viral infections: Examples include measles, mumps, rubella, and chickenpox
    • Local viral infection: For example, the common cold is a viral infection of the upper respiratory tract.
  4. Though viruses are intracellular obligate parasites, both humoral immunity and cell-mediated immunity play active roles in controlling viral infection. Cytotoxic T cells kill the virally infected cells, and antibodies neutralize the viruses circulating in the body fluids such as blood and CSF. 
  5. Viral infections are often diagnosed by PCR assay for viral DNA or RNA or by serologic tests for specific antibodies or detection of specific viral antigens.

You may also like to read: Differences Between Bacteria and Viruses

Features of Bacterial Infections

  1. The initial step in the process of many bacterial infections is the adherence of the organism to mucous membranes. Many bacterial components such as pili (fimbriae), glycocalyx, capsule, lipoteichoic acid, etc. mediate the attachment process.
  2. Most bacterial infections are acquired from external sources. However, some bacterial infections are caused by members of the normal flora when there are breaches in the anatomical barriers (e.g. trauma) or when the host immune status is weakened.
  3. Most bacterial infections are communicable but some are not, for example, botulism and Legionella pneumophila.
  4. Bacteria cause disease by two major mechanisms: toxin production (exotoxins and endotoxins) and invasion and inflammation.
  5. Polymorphonuclear leukocytes (PMNs) are the predominant cellular defense in bacterial infection.
  6. Host defenses against bacterial infections include both innate and adaptive immunity. Innate defenses are nonspecific and may include physical barriers, cells, and proteins. Adaptive (acquired) defenses are highly specific for the organism and include antibodies and cells such as CD4-positive helpers;
  7. Microbiologic diagnosis of bacterial infections frequently is made using Gram stain and culture. Gram stain evaluation of direct smears is routinely used to diagnose bacterial infections.
  8. Serologic tests and polymerase chain reactions (PCR) assays are also useful for diagnosing viral infections. Serologic tests are done for systemic bacterial infections, whereas PCR assays are reserved for non-cultivable or hard-to-culture bacterial pathogens.

Differences between Bacterial and Viral Infections 

Bacterial InfectionsViral Infections 
Bacterial infections are treated with antibiotics. Antimicrobial susceptibility testing is done to select appropriate antimicrobial agents for the treatment.Antibiotics are ineffective in controlling viral infections. Antiviral agents are used to treat viral infections. 
Bacterial infections can be both symptomatic as well as asymptomatic. Although the infection is asymptomatic initially, it may later manifest as a disease. Asymptomatic carriers of bacteria can transmit diseases to other individuals. For example, cholera, typhoid, and tuberculosis.Most viral infections are asymptomatic. Even if symptomatic, they are mild.  
Effective antimicrobial therapy is required for the treatment of symptomatic bacterial infections. Most viral infections resolve spontaneously. Examples include adenovirus infection and the common cold.
Polymorphonuclear neutrophils (PMNs) numbers increase significantly during bacterial infections. However, in certain bacterial infections, such as typhoid fever, a decrease in the number of leukocytes (leukopenia) occurs. Viral infections are lymphocyte-predominant. Macrophages, particularly fixed macrophages of the reticuloendothelial system and alveolar macrophages, are the important cell types in limiting viral infection. 
Bacterial meningitis is associated with low glucose concentrations in CSF.Viral central nervous system infections (CNS) have normal glucose levels. 
Only a few bacterial infections are associated with cancers. Bacterial infections associated with cancers are Helicobacter pylori and Campylobacter jejuniCertain viruses such as HPV, HIV, HBV, etc. can cause or predispose to cancer. Viruses account for 12% to 20% of cancer cases worldwide. 
Direct gram stain of the sample is an important step in the laboratory diagnosis of bacterial infection. Cytopathic effect (CPE) is an important initial step in the laboratory diagnosis of many viral infections. CPE is a hallmark of the cell’s viral infection, but all viruses do not cause CPE.
Examples of bacterial infections include cholera, enteric fever, gonorrhea, syphilis, tuberculosis, leprosy, etc. Examples of viral infections include the common cold, chickenpox, flu, measles, mumps, COVID-19, Japanese encephalitis, dengue, AIDS, etc. 

References

Difference between B Cells and T Cells

T cells and B cells are white blood cells that are important cells for adaptive immunity. Like all blood cells, they are made in the bone marrow. While B-cells mature in the bone marrow, T-cells travel through the bloodstream to the thymus (a small organ between the lungs and behind the sternum) and mature there. Broadly speaking T cells can be divided into two different types, ‘killer T-cells’ and ‘helper T-cells’.

Regulatory T cells (also called Tregs) are another types of T cells.
Tregs have a role in regulating or suppressing other cells in the immune system. 2018 Nobel prize in Physiology and Medicine is related to negative immune regulation. Find more in nobelprize.org

Killer T cells also known as cytotoxic T cells (CTL) hunt down and destroy cells that are infected with germs or that have become cancerous while helper T cells help B cells to make antibodies. T helper (TH) cells express CD4 molecules and are restricted to recognizing antigens bound to class II MHC molecules, whereas T cytotoxic (TC) cells express CD8 and are restricted to recognizing antigens bound to class I MHC molecules. Cytotoxic T cells kill cells that are infected with viruses or altered self-cell with toxic mediators (perforin and granzymes).

B cells are major cells of humoral (antibody-mediated) immunity, effector B cells (plasma cells) produce antibodies that circulate, capture and destroy antigens.

Helper T cells and B Cell Interactions (Source: Kubay Immunology)

Circulating helper T cells recognize exogenous antigens and produce cytokines. Two major groups of helper T cells are known as Th1 and Th2 cells. Th1 cells predominantly produce interferon-g (IFN-g), which promotes cell-mediated immune mechanisms. Th2 cells produce mostly interleukin-4 (IL-4), which promotes humoral immunity by activating B cells.

When a naïve (virgin) B cell first encounters the antigen that matches its membrane-bound antibody, the binding of the antigen to the antibody causes the cell to divide rapidly (clonal expansion); its progeny differentiates into memory B cells and effector B cells called plasma cells. Plasma cells secrete antibodies which act as major effector molecules of humoral immunity.

Some of the major differences between B Cells and T Cells are tabulated below:

Features B Cells T Cells
Maturation Bone Marrow  (Bursal equivalent) Thymus
Involvement of MHC moleculesNone requiredRequired to display processed antigen
Recognition of Antigen
B Cells can recognize and bind to soluble antigens. T-cell receptor (TCR) does not recognize the free antigens. T cells can recognize an antigen only when it is associated with self MHC molecule on the surface of a self-cell (either an antigen-presenting cell or altered self cell or on a virus-infected cell and graft).  
Chemical nature of antigen
B cells recognize an enormous variety of antigens such as proteins, polysaccharides, and lipids.

T cells recognize protein epitopes displayed together with MHC molecules on self-cells, but some lipids and glycolipids are presented on MHC-like molecules.
Interaction with antigenInvolves binary complex of membrane Immunoglobulin and AntigenInvolves ternary complex of the T-cell receptor, antigen, and MHC molecule




Epitope properties Accessible, hydrophilic, mobile peptides containing sequential or nonsequential amino acids

Internal linear peptides produced by processing of antigen and bound to MHC molecules
Antigen Specificity Antigen specificity of each B cell is determined by the membrane-bound antigen-binding receptor (antibody) expressed by the cell. Antigenic specificity of T Cells is determined by antigen-binding T-cell receptor (TCR) on T Cells. TCR genes are capable of generating on the order of 10^9 unique antigenic specificities.  
Peripheral Blood 10-15% of total lymphocytes 70-80% of total lymphocytes
Antigen recognition receptors Membrane-bound immunoglobulin (IgM or IgD complexed with Igα /Igβ) molecules serve as receptors for antigens.

T cell receptors (TCR) complexed with CD3 (signal-transduction element of the T-cell receptor)  
CD markers CD32/FcγRII (Receptor for Fc region of IgG), CD35 or CR1 Receptor for complement (C3b), and CD40 (Signal transduction)CD3, CD4 (adhesion molecule that binds to class II MHC molecules; signal transduction),
CD8 (adhesion molecule that binds to class I MHC molecules; signal transduction), CD28 (receptor for co-stimulatory B7 molecule on antigen-presenting cells), CD45 (a signal-transduction molecule)

References and further reading:

T Dependent Antigen, T Independent Antigen

Activation of B cells requires two signals. Depending on the nature of the antigen, B-cell activation proceeds by two different routes, one dependent on helper T cells (TH cells), the other not.  In the case of T-dependent antigen the interaction between CD40 of B Cells and CD40 ligand of T cells gives a second signal but in T independent antigen, cross-linking of membrane-bound immunoglobulin to polymeric carbohydrate gives the needed signal.

B cells activation by T-independent antigen and T-dependent antigen
(Source: Kuby Immunology)

The B-cell response to thymus-dependent (TD) antigens requires direct contact with TH cells, not simply exposure to TH-derived cytokines.

 Antigens that can activate B cells in the absence of this kind of direct participation by TH cells are known as thymus-independent (TI) antigens. TI antigens are divided into types 1 and 2, and they activate B cells by different mechanisms whereas polymeric proteins e.g., bacterial flagellin acts as Type 2 thymus-independent (TI-2) antigens.

T Independent (TI) Antigen

A typical large polysaccharide is made up of repeating sequences of a few simple sugars so it has multiple copies of identical antigenic determinants.

When specific naïve B cells come in contact with such antigens, these antigenic determinants bind the surface IgM and IgD receptors. This binding leads to the clustering of surface immunoglobulins which generates a signal, strong enough to activate the naïve B cells. These activated B cells produce and release first immunoglobulin i.e. IgM.

Most TI-1 antigens are polyclonal B-cell activators (mitogens); i.e. they are able to activate B cells regardless of their antigenic specificity. At higher concentrations, some TI-1 antigens will stimulate proliferation and antibody secretion by as many as one-third of all B cells but in lower concentrations of TI-1 antigens, only those B cells specific for epitopes of the antigen will be activated.

TI-2 antigens activate B cells by extensive crosslinking of membrane-bound immunoglobulin (mIg) receptors. 


Unlike TI-1 antigens, TI-2 antigens do not act as polyclonal activators, activate only mature B cells, and may require cytokines derived from TH cells.

Interaction of B cell receptors with T independent antigen

Main features of T Independent Antigen (Ti-Ag)

  • Antigens that stimulate B-cells directly, without co-stimulation by helper T-cells
  • Usually polysaccharides or lipopolysaccharides (e.g. bacterial capsules)
  • Crosslink antigen receptors on the surface of B-cells to activate them
  • Don’t generate a strong immune response (no memory cells, IgM is the only antibody class produced, and the immunity doesn’t last long).

T Dependent Antigen (Td-Ag)

Humoral response to protein and most other antigens requires the interaction of B cells with helper T cells. These are thymus-dependent or simply T-dependent (TD) responses. B cell activation by T-dependent antigens requires contact-dependent help delivered by the interaction between CD40 on B cells and CD40L on activated  TH cells.

Main steps during B-cell activation by a thymus-dependent antigen:

  • Soluble protein antigens which bind to membrane-bound immunoglobulin on the surface of B Cell are internalized, processed, and displayed as peptide-MHC-II complexes.
  • TH cell recognizes class II MHC-antigen complex on B-cell surface via TCR. It also interacts with costimulatory molecule B7 via CD28. These interactions activate TH cells. Activated TH  cells produce various cytokines.
  • TH cell begins to express CD40L and interacts with CD40 of the B Cell. The interaction between CD40 and CD40L provides a second signal to activate B cells.
  • B cells begin to express receptors for various cytokines and bind to cytokines released from TH cells. Which activates B cells and differentiates them into plasma cells.
  • The activated B-cell clonally proliferates to produce a population of plasma cells and memory cells, which all recognize the same antigen.

This CD40/CD40L interaction is essential for B-cell survival, the formation of germinal centers, the generation of memory-cell populations, and somatic hypermutation (for affinity maturation).

Difference between T dependent Antigen and T independent Antigen

T dependent (TD) Antigen
T independent Antigen
Soluble proteins 
Bacterial cell wall components Lipopolysaccharide (LPS), Capsular polysaccharide, flagella, etc.

Antigen is processed and displayed on the surface of antigen-presenting cells (B Cells) in association with MHC-II.

Antigen processing is not needed

Immunogenic over a wide range of dose

Dose-dependent immunogenicity
No polyclonal activation i.e. Activate B cells monoclonally.
Polyclonal activation of B cells occurs in high doses of Type-I TI Antigens
Immunologic memory present
No immunologic memory
Affinity maturation- YesAffinity maturation- No
Isotype switching occurs  (i.e. antibodies of all classes are produced)No isotype switching 
( Antibody response is restricted to IgM and IgG3)
Activate mature B cells only
Activate both mature and immature B cells

Conjugate vaccines:  A way of developing IgG response against polysaccharide antigen.

Capsular polysaccharides (e.g. of Neisseria meningitidis,  Haemophilus influenzae,  Streptococcus pneumoniae) and/or lipopolysaccharides (major cell wall component of Gram-negative bacteria e.g. Salmonella typhi, E.coli, etc) are the major structural components of bacterial pathogens. But these polysaccharide antigens are mostly poor immunogens; the antibody response to these antigens is mostly restricted to IgM (lack of isotype switching) because of their T-lymphocyte independent (TI) nature. IgM antibodies though excellent in activating complement penetrate poorly into tissues and are not themselves opsonizing. Anti-polysaccharide immune response is also characterized by a lack of T-lymphocyte memory. 

Immunity against these surface components confers protection against the disease caused by these pathogens but the most vulnerable age group (children below 2 years of age and the elderly) responds poorly to carbohydrate antigen.  If the B cells are switched to produce IgG, the vaccine would be more effective. To overcome the problem that arises due to TI nature of carbohydrate antigen and to produce IgG response against such antigen conjugate vaccine is being used.

Antibody responses to polysaccharide antigens like pneumococcal or meningococcal capsular antigen are restricted to IgM, which Polysaccharide antigens are mostly poor immunogens due to their T-lymphocyte independent (TI) nature. Often, an anti-polysaccharide immune response is characterized by a lack of T-lymphocyte memory and a lack of isotype switching.  Children below 2 years of age and the elderly (who are most vulnerable to disease caused by these pathogens) poorly respond to polysaccharides antigens.

In the conjugate vaccine, carbohydrate is coupled to an immunogenic protein also known as carrier molecule/peptide. Generally, formalin-inactivated diphtheria toxin is used as a carrier molecule.

Generation of IgG response against polysaccharide antigen by conjugate vaccine

 Here is how the conjugate vaccine works:

  • In conjugate vaccine, the capsular polysaccharide is coupled with highly immunogenic protein (which is commonly a diphtheria toxin).
  • B cell-specific to the polysaccharide antigen binds to polysaccharide antigen, and endocytose polysaccharide antigen along with the coupled protein.
  • The protein is broken down into various peptides. Some of the processed peptides are loaded on MHC Class II molecules and move to the surface for recognition by the T cells (i.e. Processing and Presentation of Peptide antigen presentation by B cell)
  • Carrier peptide-specific T cells (mainly follicular helper T Cells), recognize the MHC-II peptide antigen by its T Cell Receptor (TCR). Engagement of CD40 and CD40 ligand also takes place which gives switch signal.
  • The activated B cell first secretes anti-carbohydrate IgM antibodies and because of the T cell’s help, it then switches to secreting IgG antibodies.
  • Thus by coupling the protein with polysaccharide antigen we make the B cell able to do something that it could not have done on its own.

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